Genome analysis pipeline on midas
Project has moved back to https://github.com/timdiels/CoExpNetViz
Cytoscape App for the Jesse graphlet counting algorithm https://github.com/biointec/jesse
My PhD dissertation source files and build script (pandoc with LaTeX).
vHRR: co-expression based gene function prediction
Documentation website for abb deployed at: https://bedro.pages.psb.ugent.be/abb-website
Utilities and CLI for MORPH bulk runs
generate a report on an experiment run on wiwam
If you have a list of genes that you would like to extract from a fasta file, this tool might help.
Collaboration with Microbiology group to evaluate peptides for antimicrobial activity.
Script here is for cutting protein sequences into k mers
Interactive figure generator for clustered expression data
Web version of Tapir: http://bioinformatics.psb.ugent.be/webtools/tapir/
Scripts for paper: Network motif modules in integrated gene regulatory networks of worm and plant
Cytoscape App for the ISMAGS motif detection algorithm