Home.markdown

+# Tapir #
+
+Web version of Tapir:
+http://bioinformatics.psb.ugent.be/webtools/tapir/
+
+
+## Changes ###
+yalin has adjusted the scripts so tapir can be run from the command line and on the cluster.
+
+thpar has added a simple fasta parser in the module FastaCheck.pm which prevents invalid input files to be passed on to the tapir algorithm.
+
+
+## Locations ##
+The tapir tool is spread over multiple locations on the servers.
+
+Webtool:  
+`/www/group/biocomp/extra/bioinformatics_prod/webtools/tapir`
+
+
+Data (on shaman.psblocal):  
+`/data/tapir`
+
+To update microRNA files, the files in this directory should be replaced. Each file gets an option entry in the index.php file of the webtool.
+
+
+Scripts:  
+`/www/group/biocomp/extra/shaman/cgi-apps/biocomp/tapir`
+