Commit e32b6c67 authored by Thomas Van Parys's avatar Thomas Van Parys
Browse files

Make input data validation more lenient towards CDS and GFF3 (#47)

parent 1210d2b9
...@@ -132,18 +132,12 @@ Channel ...@@ -132,18 +132,12 @@ Channel
} }
//Validation //Validation
if ( !(specie.plazaId || ( specie.proteome && specie.cds ))){ if (!(specie.plazaId || specie.proteome)){
error( error(
"$specie.name needs paths to proteome and CDS fasta files, or a valid Plaza ID" "$specie.name needs path to proteome file or a valid Plaza ID"
) )
} }
if ( specie.type == 'new ' && !specie.gff3 ){
error(
"New species $specie.name needs a GFF3 annotation file."
)
}
return specie return specie
} }
.set { species } .set { species }
......
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