Commit b5478d0c authored by Thomas Van Parys's avatar Thomas Van Parys
Browse files

Keep storage off for now

parent e3134618
...@@ -74,6 +74,7 @@ java.lang.String.metaClass { ...@@ -74,6 +74,7 @@ java.lang.String.metaClass {
} }
/////////////////////// ///////////////////////
// Input processing // Input processing
...@@ -356,7 +357,7 @@ process allVsAllProteomes { ...@@ -356,7 +357,7 @@ process allVsAllProteomes {
tag "$hitsName" tag "$hitsName"
publishDir "${params.output}/proteome_blast_all_vs_all", mode: 'copy' publishDir "${params.output}/proteome_blast_all_vs_all", mode: 'copy'
storeDir "${params.storage}/proteome_blast_all_vs_all" //storeDir "${params.storage}/proteome_blast_all_vs_all"
input: input:
set file(fasta), database, databaseName, hitsName, speciesName, databaseSpeciesName from allVsAllInput set file(fasta), database, databaseName, hitsName, speciesName, databaseSpeciesName from allVsAllInput
...@@ -456,7 +457,7 @@ process ips { ...@@ -456,7 +457,7 @@ process ips {
module 'iprscan' // known stable iprscan/x86_64/5.22-61 . TODO old comment: the newer version crashed with stack trace due to a dependency problem (may have been fixed by now) module 'iprscan' // known stable iprscan/x86_64/5.22-61 . TODO old comment: the newer version crashed with stack trace due to a dependency problem (may have been fixed by now)
// this version is stable, newer versions caused all sorts of errors. TODO old comment: the newer version crashed with stack trace due to a dependency problem (may have been fixed by now) // this version is stable, newer versions caused all sorts of errors. TODO old comment: the newer version crashed with stack trace due to a dependency problem (may have been fixed by now)
publishDir "${params.output}/interproscan", mode: 'copy' publishDir "${params.output}/interproscan", mode: 'copy'
storeDir "${params.storage}/interproscan" //storeDir "${params.storage}/interproscan"
tag "$species" tag "$species"
cpus 8 cpus 8
......
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