Commit 8180c0fa authored by timdiels's avatar timdiels
Browse files

add to: clime: activate venv first

parent c467e2f4
......@@ -625,6 +625,7 @@ process climeGeneInfo {
script:
"""
$activate_venv
cedalion-gene-info --species $speciesFile --output gene_info.txt
"""
}
......@@ -657,6 +658,7 @@ process climeMatrix {
script:
"""
$activate_venv
cedalion-clime-matrix --row-species $species $colSpecies --genes $geneInfoFile --gene-families $orthoGroups --output ${species}.clime_matrix
"""
}
......
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