Cecilia SENSALARI (3ea3a605) at 01 Mar 15:38
Merge branch 'orthofinder' into 'master'
... and 36 more commits
Cecilia SENSALARI (093483ac) at 18 Nov 09:39
GFF fix: doesn't crash for empty lines
... and 3 more commits
Cecilia SENSALARI (3972328b) at 01 Aug 16:30
Get WGD anchors age in t; plot DataFrame of clade
Cecilia SENSALARI (1757c4fd) at 31 Jul 10:18
New file to get wgd dating in t
Cecilia SENSALARI (6b0750fb) at 28 Jul 13:10
Delete deprecated code lines
Cecilia SENSALARI (61d3d8fc) at 28 Jul 13:03
Gene count file with both original and OF
Cecilia SENSALARI (9c3d1879) at 26 Jul 16:03
Handle when two original GFs match the same OF GF
Cecilia SENSALARI (cc0e3799) at 25 Jul 11:51
Add multi index (original GF and OrthFind GF)
... and 1 more commit
Cecilia SENSALARI (81710766) at 22 Jul 10:03
Get gene count of clade species altogether
Cecilia SENSALARI (71e2e51d) at 20 Jul 11:36
Fix: checks if there are genes from focal species
Cecilia SENSALARI (21d1701e) at 14 Jul 12:04
Merge GFs and generate gene counts
... and 2 more commits
Cecilia SENSALARI (fadb3fa9) at 08 Jun 21:02
Integration of OrthoFinder in ksrates
Cecilia SENSALARI (2a0b9052) at 27 May 09:18
Adapt to OrthoFinder run without focal species
Cecilia SENSALARI (724b83ed) at 17 May 14:38
Update ksrates analysis of OrthoFinder results
Cecilia SENSALARI (ca4a7a56) at 06 May 20:16
Update OrthoFinder top 2000 orthogroups analysis
Cecilia SENSALARI (87b2eede) at 05 May 17:04
Update orthofinder results analysis
... and 1 more commit